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Overexposure to ultraviolet radiation (UVR) emitted by the sun can damage and kill living cells in animals, plants, and microorganisms. In aquatic environments, UVR can penetrate nearly 47 m into the water column, severely impacting many marine organisms. Jellyfish are often considered resilient to environmental stressors, potentially explaining their success in environmentally disturbed areas, but the extent of their resilience to UVR is not well known. Here, we tested resiliency to UVR by exposing benthic polyps of the moon jellyfish,Aureliasp., to UVA and UVB—the two types of UVR that reach Earth’s surface—both separately and in combination. We quantified asexual reproduction rates and polyp attachment to hard substrate, in addition to qualitative observations of polyp health. There were no differences in asexual reproduction rates between polyps exposed to isolated UVA and polyps that received no UVR. Polyps reproduced when exposed to short term (∼7–9 days) isolated UVB, but long-term exposure limited reproduction and polyp attachment to the substrate. When exposed to both UVA and UVB, polyps were unable to feed and unable to remain attached to the substrate, did not reproduce, and ultimately, experienced 100% mortality within 20 days. Although many studies only examine the effects of UVB, the combination of UVA and UVB here resulted in greater negative impacts than either form of UVR in isolation. Therefore, studies that only examine effects of UVB potentially underestimate environmentally relevant effects of UVR. These results suggest that polyps are unsuccessful under UVR stress, so the planula larval stage must settle in low-UVR environments to establish the success of the polyp stage. 

Elucidating protein rigidity offers insights about protein conformational changes. An understanding of protein motion can help speed drug development, and provide general insights into the dynamic behaviors of biomolecules. Existing rigidity analysis techniques employ fine-grained, all-atom modeling, which has a costly run-time, particularly for proteins made up of more than 500 residues. In this work, we introduce coarse-grained rigidity analysis, and showcase that it provides flexibility information about a protein that is similar in accuracy to an all-atom modeling approach. We assess the accuracy of the coarse-grained method relative to an all-atom approach via a comparison metric that reasons about the largest rigid clusters of the two methods. The apparent symmetry between the all-atom and coarse-grained methods yields very similar results, but the coarse-grained method routinely exhibits 40% reduced run-times. The CGRAP web server outputs rigid cluster information, and provides data visualization capabilities, including a interactive protein visualizer. 

Abstract Urban evolutionary ecology is inherently interdisciplinary. Moreover, it is a field with global significance. However, bringing researchers and resources together across fields and countries is challenging. Therefore, an online collaborative research hub, where common methods and best practices are shared among scientists from diverse geographic, ethnic, and career backgrounds would make research focused on urban evolutionary ecology more inclusive. Here, we describe a freely available online research hub for toolkits that facilitate global research in urban evolutionary ecology. We provide rationales and descriptions of toolkits for: (1) decolonizing urban evolutionary ecology; (2) identifying and fostering international collaborative partnerships; (3) common methods and freely‐available datasets for trait mapping across cities; (4) common methods and freely‐available datasets for cross‐city evolutionary ecology experiments; and (5) best practices and freely available resources for public outreach and communication of research findings in urban evolutionary ecology. We outline how the toolkits can be accessed, archived, and modified over time in order to sustain long‐term global research that will advance our understanding of urban evolutionary ecology.